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1

PlantTFDB 4.0: toward a central hub for transcription factors and regulatory interactions in plants

Jin, Jinpu, Tian, Feng, Yang, De-Chang, Meng, Yu-Qi, Kong, Lei, Luo, Jingchu, Gao, Ge

Journal:

Nucleic Acids Research

Year:

2017

Language:

english

File:

PDF, 990 KB

english, 2017

2

Go!Poly: A gene-oriented polymorphism database

Ge Zhang, Sizhong Zhang, Wei Chen, Weimin Qiu, Hui Wu, Jianmin Wang, Jingchu Luo, Xiaocheng Gu, Richard G.H. Cotton

Journal:

Year:

2001

Language:

english

File:

PDF, 385 KB

english, 2001

3

Exploring consensus mRNA secondary (folding) structure units by stochastic sampling and folding simulation

Kunlin Zhang, Jingchu Luo, Ciquan Liu

Journal:

Journal of Molecular Structure: THEOCHEM

Year:

2005

Language:

english

File:

PDF, 156 KB

english, 2005

4

Rice-Map: a new-generation rice genome browser

Jun Wang, Lei Kong, Shuqi Zhao, He Zhang, Liang Tang, Zhe Li, Xiaocheng Gu, Jingchu Luo, Ge Gao

Journal:

Year:

2011

Language:

english

File:

PDF, 1.26 MB

english, 2011

5

The toxicity test and hypothetical model ofBacillus thuringiensisCry1Aa helix4

Yanhui Su, Hong Qu, Vincent Vachon, Jingchu Luo, Jie Zhang, Raynald Laprade, Yuxian Zhu

Journal:

SCIENCE CHINA Life Sciences

Year:

2002

Language:

english

File:

PDF, 1.04 MB

english, 2002

6

PepPat, a pattern-based oligopeptide homology search method and the identification of a novel tachykinin-like peptide

Ying Jiang, Ge Gao, Gang Fang, Eric L. Gustafson, Maureen Laverty, Yanbin Yin, Yong Zhang, Jingchu Luo, Jonathan R. Greene, Marvin L. Bayne, Joseph A. Hedrick, Nicholas J. Murgolo

Journal:

Mammalian Genome

Year:

2003

Language:

english

File:

PDF, 261 KB

english, 2003

7

Secreted protein prediction system combining CJ-SPHMM, TMHMM, and PSORT

Yunjia Chen, Peng Yu, Jingchu Luo, Ying Jiang

Journal:

Mammalian Genome

Year:

2003

Language:

english

File:

PDF, 157 KB

english, 2003

8

The MYB Transcription Factor Superfamily of Arabidopsis: Expression Analysis and Phylogenetic Comparison with the Rice MYB Family

Chen Yanhui, Yang Xiaoyuan, He Kun, Liu Meihua, Li Jigang, Gao Zhaofeng, Lin Zhiqiang, Zhang Yunfei, Wang Xiaoxiao, Qiu Xiaoming, Shen Yunping, Zhang Li, Deng Xiaohui, Luo Jingchu, Deng Xing-Wang, Che

Journal:

Plant Molecular Biology

Year:

2006

Language:

english

File:

PDF, 587 KB

english, 2006

9

Identification of a Naturally Occurring Recombinant Isolate ofSugarcane Mosaic VirusCausing Maize Dwarf Mosaic Disease

Yongwang Zhong, Anyuan Guo, Chunbo Li, Binquan Zhuang, Ming Lai, Chunhong Wei, Jingchu Luo, Yi li

Journal:

Year:

2005

Language:

english

File:

PDF, 355 KB

english, 2005

10

Evidence that Natural Selection is the Primary Cause of the Guanine-cytosine Content Variation in Rice Genes

Xiaoli Shi, Xiyin Wang, Zhe Li, Qihui Zhu, Ji Yang, Song Ge, Jingchu Luo

Journal:

Journal of Integrative Plant Biology

Year:

2007

Language:

english

File:

PDF, 105 KB

english, 2007

11

A nonsynonymous SNP in human cytosolic sialidase in a small Asian population results in reduced enzyme activity: potential link with severe adverse reactions to oseltamivir

Li, Chuan-Yun, Yu, Quan, Ye, Zhi-Qiang, Sun, Ying, He, Quanyuan, Li, Xiao-Mo, Zhang, Wuxue, Luo, Jingchu, Gu, Xiaocheng, Zheng, Xiaofeng

Journal:

Year:

2007

Language:

english

File:

PDF, 486 KB

english, 2007

12

Duplication and DNA segmental loss in the rice genome: implications for diploidization

Xiyin Wang, Xiaoli Shi, Bailin Hao, Song Ge, Jingchu Luo

Journal:

New Phytologist

Year:

2005

Language:

english

File:

PDF, 279 KB

english, 2005

13

Advances in G-protein coupled receptor research and related bioinformatics study

Yanbin Yin, Jingchu Luo, Ying Jiang

Journal:

Chinese Science Bulletin

Year:

2003

Language:

english

File:

PDF, 275 KB

english, 2003

14

Expression pattern divergence of duplicated genes in rice

Zhe Li, He Zhang, Song Ge, Xiaocheng Gu, Ge Gao, Jingchu Luo

Journal:

BMC Bioinformatics

Year:

2009

Language:

english

File:

PDF, 570 KB

english, 2009

15

Statistical inference of chromosomal homology based on gene colinearity and applications toArabidopsisand rice

Xiyin Wang, Xiaoli Shi, Zhe Li, Qihui Zhu, Lei Kong, Wen Tang, Song Ge, Jingchu Luo

Journal:

BMC Bioinformatics

Year:

2006

Language:

english

File:

PDF, 716 KB

english, 2006

16

PCAS - a precomputed proteome annotation database resource

Yong Zhang, Yanbin Yin, Yunjia Chen, Ge Gao, Peng Yu, Jingchu Luo, Ying Jiang

Journal:

Year:

2003

Language:

english

File:

PDF, 360 KB

english, 2003

17

Identification and analysis of domains in proteins

Islam, Suhail A., Luo, Jingchu, Sternberg, Michael J.E.

Journal:

Protein Engineering Design and Selection

Year:

1995

Language:

english

File:

PDF, 5.58 MB

english, 1995

18

A predicted three-dimensional structure for the carcinoembryonic antigen (CEA)

Paul A. Bates, Jingchu Luo, Michael J.E. Sternberg

Journal:

Year:

1992

Language:

english

File:

PDF, 947 KB

english, 1992

19

Systematic high-yield production of human secreted proteins in Escherichia coli

Xueyu Dai, Qiang Chen, Min Lian, Yanfeng Zhou, Mo Zhou, Shanyun Lu, Yunjia Chen, Jingchu Luo, Xiaocheng Gu, Ying Jiang, Ming Luo, Xiaofeng Zheng

Journal:

Biochemical and Biophysical Research Communications

Year:

2005

Language:

english

File:

PDF, 619 KB

english, 2005

20

Nucleotide substitution pattern in rice paralogues: Implication for negative correlation between the synonymous substitution rate and codon usage bias

Xiaoli Shi, Xiyin Wang, Zhe Li, Qihui Zhu, Wen Tang, Song Ge, Jingchu Luo

Journal:

Year:

2006

Language:

english

File:

PDF, 294 KB

english, 2006

21

Genome-wide identification and evolutionary analysis of the plant specific SBP-box transcription factor family

An-Yuan Guo, Qi-Hui Zhu, Xiaocheng Gu, Song Ge, Ji Yang, Jingchu Luo

Journal:

Year:

2008

Language:

english

File:

PDF, 733 KB

english, 2008

22

Efficient targeted anticoagulant with active RGD motif

Qun Bi, Xue Zhou, Xiaodong Cen, Hong Qu, Jingchu Luo, Yixiu Huang, Shenggeng Zhu

Journal:

Thrombosis Research

Year:

2007

Language:

english

File:

PDF, 614 KB

english, 2007

23

PPF-1, a post-floral-specific gene expressed in short-day-grown G2 pea may be important for its never-senescing phenotype

Yuxian Zhu, Yifeng Zhang, Jingchu Luo, Peter J Davies, David T-H Ho

Journal:

Year:

1998

Language:

english

File:

PDF, 487 KB

english, 1998

24

ABrowse - a customizable next-generation genome browser framework

Lei Kong, Jun Wang, Shuqi Zhao, Xiaocheng Gu, Jingchu Luo, Ge Gao

Journal:

BMC Bioinformatics

Year:

2012

Language:

english

File:

PDF, 551 KB

english, 2012

25

Developmental stage related patterns of codon usage and genomic GC content: searching for evolutionary fingerprints with models of stem cell differentiation

Lichen Ren, Ge Gao, Dongxin Zhao, Mingxiao Ding, Jingchu Luo…

Journal:

Year:

2007

Language:

english

File:

PDF, 435 KB

english, 2007

26

Duplication and DNA Segmental Loss in the Rice Genome: Implications for Diploidization

Xiyin Wang, Xiaoli Shi, Bailin Hao, Song Ge and Jingchu Luo

Journal:

New Phytologist

Year:

2005

Language:

english

File:

PDF, 1.46 MB

english, 2005

27

Bioinformatics Service, Research and Education at CBI

Journal:

Asia-Pacific Biotech News

Year:

2003

Language:

english

File:

PDF, 136 KB

english, 2003

28

An Arabidopsis Transcriptional Regulatory Map Reveals Distinct Functional and Evolutionary Features of Novel Transcription Factors

Jin, Jinpu, He, Kun, Tang, Xing, Li, Zhe, Lv, Le, Zhao, Yi, Luo, Jingchu, Gao, Ge

Journal:

Molecular Biology and Evolution

Year:

2015

Language:

english

File:

PDF, 947 KB

english, 2015

29

Construction of multiple copy of α-domain gene fragment of human liver metallothionein I A in tandem arrays and its expression in transgenic tobacco plants

Pan, Aihua, Tie, Feng, Yang, Meizhu, Luo, Jingchu, Wang, Zhengxing, Ding, Xiang, Li, Lingyuan, Chen, Zhangliang, Ru, Binggen

Journal:

Protein Engineering Design and Selection

Year:

1993

Language:

english

File:

PDF, 3.98 MB

english, 1993

30

Identification and analysis of unitary loss of long-established protein-coding genes in Poaceae shows evidences for biased gene loss and putatively functional transcription of relics

Zhao, Yi, Tang, Liang, Li, Zhe, Jin, Jinpu, Luo, Jingchu, Gao, Ge

Journal:

BMC Evolutionary Biology

Year:

2015

Language:

english

File:

PDF, 1.23 MB

english, 2015

31

Bringing Biocuration to China

Zhang, Zhang, Zhu, Weimin, Luo, Jingchu

Journal:

Genomics, Proteomics & Bioinformatics

Year:

2014

Language:

english

File:

PDF, 418 KB

english, 2014

32

Purification, Characterization, and Molecular Cloning of the Gene of a Seed-Specific Antimicrobial Protein from Pokeweed

Yingfang Liu, Jingchu Luo, Chunyu Xu, Fucheng Ren, Cheng Peng, Guangyao Wu and Jindong Zhao

Journal:

PLANT PHYSIOLOGY

Year:

2000

Language:

english

File:

PDF, 1.71 MB

english, 2000

33

GSA and BIGD: Filling the Gap of Bioinformatics Resource and Service in China *

Journal:

Genomics, Proteomics & Bioinformatics

Year:

2017

Language:

english

File:

PDF, 432 KB

english, 2017

34

Novel Y-chromosomal microdeletions associated with non-obstructive azoospermia uncovered by high throughput sequencing of sequence-tagged sites (STSs)

Liu, Xiao, Li, Zesong, Su, Zheng, Zhang, Junjie, Li, Honggang, Xie, Jun, Xu, Hanshi, Jiang, Tao, Luo, Liya, Zhang, Ruifang, Zeng, Xiaojing, Xu, Huaiqian, Huang, Yi, Mou, Lisha, Hu, Jingchu, Qian, Weip

Journal:

Scientific Reports

Year:

2016

Language:

english

File:

PDF, 1.06 MB

english, 2016

35

Whole-Exome Sequencing for the Identification of Susceptibility Genes of Kashin–Beck Disease

Yang, Zhenxing, Xu, Yu, Luo, Hongrong, Ma, Xiaohong, Wang, Qiang, Wang, Yingcheng, Deng, Wei, Jiang, Tao, Sun, Guangqing, He, Tingting, Hu, Jingchu, Li, Yingrui, Wang, Jun, Li, Tao, Hu, Xun, Palmer, N

Journal:

Year:

2014

Language:

english

File:

PDF, 185 KB

english, 2014

36

LSD 3.0: a comprehensive resource for the leaf senescence research community

Li, Zhonghai, Zhang, Yang, Zou, Dong, Zhao, Yi, Wang, Hou-Ling, Zhang, Yi, Xia, Xinli, Luo, Jingchu, Guo, Hongwei, Zhang, Zhang

Journal:

Nucleic Acids Research

Year:

2019

Language:

english

File:

PDF, 1.30 MB

english, 2019